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Roridoxin C

PubChem CID
146682784
Structure
Roridoxin C_small.png
Roridoxin C_3D_Structure.png
Molecular Formula
Synonyms
  • Roridoxin C
  • [(1R,3S,7R,9S,12R,14R,15S,16S,17R,20Z,24S,28R)-28-hydroxy-24-methoxy-10,16-dimethyl-4,19-dioxospiro[2,5,13,18,25-pentaoxahexacyclo[22.3.1.114,17.01,3.07,12.07,16]nonacosa-10,20-diene-15,2'-oxirane]-9-yl] acetate
  • ((1R,3S,7R,9S,12R,14R,15S,16S,17R,20Z,24S,28R)-28-hydroxy-24-methoxy-10,16-dimethyl-4,19-dioxospiro(2,5,13,18,25-pentaoxahexacyclo(22.3.1.114,17.01,3.07,12.07,16)nonacosa-10,20-diene-15,2'-oxirane)-9-yl) acetate
  • (1R,3S,7R,9S,12R,14R,15S,16S,17R,20Z,24S,28R)-28-Hydroxy-24-methoxy-10,16-dimethyl-4,19-dioxo-2,5,13,18,25-pentaoxaspiro(hexacyclo(22.3.1.1,.0,.0,.0,)nonacosane-15,2'-oxirane)-10,20-dien-9-yl acetic acid
  • (1R,3S,7R,9S,12R,14R,15S,16S,17R,20Z,24S,28R)-28-Hydroxy-24-methoxy-10,16-dimethyl-4,19-dioxo-2,5,13,18,25-pentaoxaspiro[hexacyclo[22.3.1.1,.0,.0,.0,]nonacosane-15,2'-oxirane]-10,20-dien-9-yl acetic acid
Molecular Weight
590.6 g/mol
Computed by PubChem 2.1 (PubChem release 2021.05.07)
Dates
  • Create:
    2020-08-12
  • Modify:
    2024-12-06
Description
Roridoxin C is a trichothecene.
Roridoxin C has been reported in Paramyrothecium roridum with data available.

1 Structures

1.1 2D Structure

Chemical Structure Depiction
Roridoxin C.png

1.2 3D Conformer

2 Names and Identifiers

2.1 Computed Descriptors

2.1.1 IUPAC Name

[(1R,3S,7R,9S,12R,14R,15S,16S,17R,20Z,24S,28R)-28-hydroxy-24-methoxy-10,16-dimethyl-4,19-dioxospiro[2,5,13,18,25-pentaoxahexacyclo[22.3.1.114,17.01,3.07,12.07,16]nonacosa-10,20-diene-15,2'-oxirane]-9-yl] acetate
Computed by Lexichem TK 2.7.0 (PubChem release 2021.05.07)

2.1.2 InChI

InChI=1S/C30H38O12/c1-16-11-20-27(13-18(16)39-17(2)31)14-36-24(33)23-28(42-23)9-10-37-30(35-4,25(28)34)8-6-5-7-22(32)41-19-12-21(40-20)29(15-38-29)26(19,27)3/h5,7,11,18-21,23,25,34H,6,8-10,12-15H2,1-4H3/b7-5-/t18-,19+,20+,21+,23+,25+,26+,27+,28-,29-,30-/m0/s1
Computed by InChI 1.0.6 (PubChem release 2021.05.07)

2.1.3 InChIKey

NIIUXENZLDFNHW-NJRWAKRPSA-N
Computed by InChI 1.0.6 (PubChem release 2021.05.07)

2.1.4 SMILES

CC1=C[C@@H]2[C@@]3(C[C@@H]1OC(=O)C)COC(=O)[C@@H]4[C@@]5(O4)CCO[C@]([C@@H]5O)(CC/C=C\C(=O)O[C@H]6[C@]3([C@]7(CO7)[C@@H](C6)O2)C)OC
Computed by OEChem 2.3.0 (PubChem release 2021.05.07)

2.2 Molecular Formula

C30H38O12
Computed by PubChem 2.1 (PubChem release 2021.05.07)

2.3 Other Identifiers

2.3.1 ChEBI ID

2.3.2 Metabolomics Workbench ID

2.3.3 Wikidata

2.4 Synonyms

2.4.1 Depositor-Supplied Synonyms

3 Chemical and Physical Properties

3.1 Computed Properties

Property Name
Molecular Weight
Property Value
590.6 g/mol
Reference
Computed by PubChem 2.1 (PubChem release 2021.05.07)
Property Name
XLogP3-AA
Property Value
0.3
Reference
Computed by XLogP3 3.0 (PubChem release 2021.05.07)
Property Name
Hydrogen Bond Donor Count
Property Value
1
Reference
Computed by Cactvs 3.4.8.18 (PubChem release 2021.05.07)
Property Name
Hydrogen Bond Acceptor Count
Property Value
12
Reference
Computed by Cactvs 3.4.8.18 (PubChem release 2021.05.07)
Property Name
Rotatable Bond Count
Property Value
3
Reference
Computed by Cactvs 3.4.8.18 (PubChem release 2021.05.07)
Property Name
Exact Mass
Property Value
590.23632664 Da
Reference
Computed by PubChem 2.1 (PubChem release 2021.05.07)
Property Name
Monoisotopic Mass
Property Value
590.23632664 Da
Reference
Computed by PubChem 2.1 (PubChem release 2021.05.07)
Property Name
Topological Polar Surface Area
Property Value
152Ų
Reference
Computed by Cactvs 3.4.8.18 (PubChem release 2021.05.07)
Property Name
Heavy Atom Count
Property Value
42
Reference
Computed by PubChem
Property Name
Formal Charge
Property Value
0
Reference
Computed by PubChem
Property Name
Complexity
Property Value
1260
Reference
Computed by Cactvs 3.4.8.18 (PubChem release 2021.05.07)
Property Name
Isotope Atom Count
Property Value
0
Reference
Computed by PubChem
Property Name
Defined Atom Stereocenter Count
Property Value
11
Reference
Computed by PubChem
Property Name
Undefined Atom Stereocenter Count
Property Value
0
Reference
Computed by PubChem
Property Name
Defined Bond Stereocenter Count
Property Value
1
Reference
Computed by PubChem
Property Name
Undefined Bond Stereocenter Count
Property Value
0
Reference
Computed by PubChem
Property Name
Covalently-Bonded Unit Count
Property Value
1
Reference
Computed by PubChem
Property Name
Compound Is Canonicalized
Property Value
Yes
Reference
Computed by PubChem (release 2019.06.18)

5 Literature

5.1 Consolidated References

6 Taxonomy

The LOTUS Initiative for Open Natural Products Research: frozen dataset union wikidata (with metadata) | DOI:10.5281/zenodo.5794106

7 Classification

7.1 ChEBI Ontology

7.2 The Natural Products Atlas Classification

7.3 LOTUS Tree

7.4 MolGenie Organic Chemistry Ontology

8 Information Sources

CONTENTS