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BioAssay: AID 871

Primary cell-based high throughput screening assay to measure STAT3 activation

The signal transducer and activator of transcription (STAT) family of transcription factors transduce signals from a variety of extracellular stimuli and are important mediators of inflammation, cell survival, differentiation, and proliferation (1, 2). STATs are activated in response to growth factors, cytokines, and G-CSF binding to cell surface receptor tyrosine kinases (1-3). In resting more ..
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 Tested Compounds
 Tested Compounds
All(194669)
 
 
Active(1772)
 
 
Inactive(192898)
 
 
 Tested Substances
 Tested Substances
All(194698)
 
 
Active(1773)
 
 
Inactive(192925)
 
 
AID: 871
Data Source: The Scripps Research Institute Molecular Screening Center (STAT3_POT_LUC_1536_%ACT)
BioAssay Type: Primary, Primary Screening, Single Concentration Activity Observed
Depositor Category: NIH Molecular Libraries Screening Center Network
BioAssay Version:
Deposit Date: 2007-12-10
Modify Date: 2008-09-11

Data Table ( Complete ):           View Active Data    View All Data
Target
BioActive Compounds: 1772
Related Experiments
Show more
AIDNameTypeProbeComment
862Primary cell-based high throughput screening assay to measure STAT3 inhibitionScreening depositor-specified cross reference
1262Confirmation cell-based high throughput screening assay to measure STAT1 activationScreening depositor-specified cross reference
1267Confirmation cell-based high throughput screening assay to measure STAT3 activationScreening depositor-specified cross reference
1306Counterscreen assay for STAT1 activators: Cell-based high throughput assay to measure NF-kappaB activationScreening depositor-specified cross reference
1309Counterscreen assay for STAT3 activators: Cell-based high throughput assay to measure NF-kappaB activationScreening depositor-specified cross reference
1316Counterscreen assay for STAT1 activators: Cell-based high throughput assay to measure STAT3 activationScreening depositor-specified cross reference
1318Counterscreen assay for STAT3 activators: Cell-based high throughput assay to measure STAT1 activationScreening depositor-specified cross reference
1397Dose response cell-based assay to measure STAT1 activationConfirmatory depositor-specified cross reference
1398Dose response cell-based assay to measure STAT3 activationConfirmatory depositor-specified cross reference
1404Dose response counterscreen for STAT1 activators: cell-based high throughput assay to measure STAT3 activationConfirmatory depositor-specified cross reference
1406Dose response counterscreen assay for STAT3 activators: cell-based high throughput assay to measure STAT1 activationConfirmatory depositor-specified cross reference
1805Summary of probe development efforts to identify activators of signal transducer and activator of transcription 3 (STAT3)Summary2 depositor-specified cross reference
2049Late stage results from the probe development effort to identify activators of signal transducer and activator of transcription 3 (STAT3).Screening depositor-specified cross reference
932Primary cell-based high throughput screening assay to measure STAT1 activationScreening same project related to Summary assay
Description:
Source (MLSCN Center Name): The Scripps Research Institute Molecular Screening Center
Center Affiliation: The Scripps Research Institute (TSRI)
Assay Provider: David Frank, Dana Farber Cancer Institute
Network: Molecular Library Screening Center Network (MLSCN)
Grant Proposal Number: 1 X01 MH079826-01
Grant Proposal PI: David Frank

External Assay ID: STAT3_POT_LUC_1536_%ACT

Name:
Primary cell-based high throughput screening assay to measure STAT3 activation.

Description:

The signal transducer and activator of transcription (STAT) family of transcription factors transduce signals from a variety of extracellular stimuli and are important mediators of inflammation, cell survival, differentiation, and proliferation (1, 2). STATs are activated in response to growth factors, cytokines, and G-CSF binding to cell surface receptor tyrosine kinases (1-3). In resting cells STATs are inactive in the cytoplasm. In response to stimuli, STATs are phosphorylated by the Janus-activated kinases (Jaks), which induces STAT dimerization and nuclear translocation, where STATs bind to specific enhancer elements in target genes (2). Although structurally similar, the seven STAT family member (STATs 1, 2, 3, 4, 5a, 5b, and 6) possess diverse biological roles (2). For example, STAT1 activation is pro-inflammatory and anti-proliferative, while STAT3 activation is anti-inflammatory and pro-apoptotic (2). STAT1 is largely responsible for mediating the effects of IFN-gamma, while STAT3 is predominantly involved in IL-6 signaling (4). STAT1 induces expression of genes that inhibit the cell cycle, and thus STAT1 is considered to have tumor suppressor properties (5). Studies show that STAT3 is activated in a majority of breast and prostate cancers, and that STAT3 inhibition using RNA interference or a dominant negative leads to reduced cell proliferation, survival, and wound healing (1, 4, 6). Blocking STAT3 interaction with the epidermal growth factor receptor (EGFR) using peptide aptamers has been shown to reduce tumor growth (7). Due to the diverse roles and potent phenotypes associated with STAT signaling, the identification of selective potentiators of STAT3 activity may lead to pharmacological tools for cancer, wound healing, and inflammatory diseases.


References:

1. Alvarez JV, Febbo PG, Ramaswamy S, Loda M, Richardson A, Frank DA. Identification of a genetic signature of activated signal transducer and activator of transcription 3 in human tumors. Cancer Res. 2005 Jun 15;65(12):5054-62.
2. Schindler C, Levy DE, Decker T. AK-STAT signaling: from interferons to cytokines. J Biol Chem. 2007 Jul 13;282(28):20059-63.
3. Germain D, Frank DA. Targeting the cytoplasmic and nuclear functions of signal transducers and activators of transcription 3 for cancer therapy. Clin Cancer Res. 2007 Oct 1;13(19):5665-9.
4. Levy DE, Darnell JE Jr. Stats: transcriptional control and biological impact. Nat Rev Mol Cell Biol. 2002 Sep;3(9):651-62.
5. Battle TE, Wierda WG, Rassenti LZ, Zahrieh D, Neuberg D, Kipps TJ, Frank DA. In vivo activation of signal transducer and activator of transcription 1 after CD154 gene therapy for chronic lymphocytic leukemia is associated with clinical and immunologic response. Clin Cancer Res. 2003 Jun;9(6):2166-72.
6. Takeda, K. Takeda K, Kaisho T, Yoshida N, Takeda J, Kishimoto T, Akira S.1998. Stat3 activation is responsible for IL-6-dependent T cell proliferation through preventing apoptosis: generation and characterization of T cell- specific Stat3-deficient mice. J. Immunol. 161:4652-4660.
7. Buerger C, Nagel-Wolfrum K, Kunz C, Wittig I, Butz K, Hoppe-Seyler F, Groner B. Sequence-specific peptide aptamers, interacting with the intracellular domain of the epidermal growth factor receptor, interfere with Stat3 activation and inhibit the growth of tumor cells. J Biol Chem. 2003 Sep 26;278(39):37610-21.


Keywords:

STAT3, signal transducer and activator of transcription 3, acute-phase response factor, APRF, transcription factor, Scripps, Scripps Florida, Molecular Library Screening Center Network, MLSCN, HTS, assay, potentiator, potentiation, activation, activator, U3A, primary, primary screen, luciferase, luminescence, reporter, 1536
Protocol
Assay Overview:
Potentiation of STAT3 transcription was measured using a human U3A fibrosarcoma cell line that stably expresses a human STAT3-luciferase construct. This cell line is deficient in STAT1. In this primary assay 194,698 test compounds were screened for their ability to increase IL-6-mediated STAT3::luciferase reporter activity. Cells were exposed to test compounds from the MLSCN library, followed by treatment with IL-6 to activate STAT3 transcription. Changes in STAT3::luciferase activity were monitored by measuring luminescence. As designed, a STAT3 potentiator will increase IL-6-mediated STAT3 transcription, thus enhancing the activity of the luciferase reporter gene, and increasing luminescence.
Protocol Summary:
This STAT3 potentiator assay was run simultaneously in the same plates as the STAT3 antagonist campaign (PubChem AID 862). The cells were grown in T-175 flasks in Dulbecco's Modified Eagle's Media (DMEM) supplemented with 10% v/v fetal bovine serum and antibiotics (50 ug/mL each of penicillin and streptomycin, 100 ug/mL neomycin) at 37 degrees C in an atmosphere of 5% CO2 and 95% relative humidity (RH). Cells were harvested by trypsinization when they passed 70% confluency.
Cells were resuspended in growth medium without phenol red, at a density of 1.88 million cells/mL and filtered through a 0.7 micron filter. Next, 4 ul of well-mixed cell suspension (7,520 cells per well) were dispensed into each well of 1536-well plates. The assay was started by immediately dispensing 28 nL of test compound (5.5 micromolar final nominal concentration in DMSO) or DMSO (less than 0.6% final concentration) to sample or control wells, respectively. The plates were then incubated for 1 hour at 37 degrees C (5% CO2, 95% RH). Then, 28nL of nifuroxazide (100 uM final concentration in DMSO) were added to a subset of control wells, to monitor that the assay was functioning properly. Next, 1 ul of human recombinant IL-6 (final nominal concentration 33 ng/mL) was dispensed into sample wells. This IL-6 concentration resulted in approximately 80% STAT3::luciferase reporter activity. Next, the plates were incubated for 6 hours at 37 degrees C (5% CO2, 95% RH). The assay was stopped by dispensing 5 ul of SteadyLite HTS luciferase substrate at room temperature to each well, followed by incubation at room temperature for 15 minutes. Luminescence was measured on the ViewLux plate reader.
Prior to % potentiation calculations, luminescence values were corrected by subtracting background luminescence, measured in wells containing media and substrate only.
The percent potentiation, referred as percent activation in the formula and data results was defined using the following mathematical formula:
% Activation = 100* (Test_Compound/Median_High_Control)
Where:
Test_Compound is defined as the luminescence value of a well containing test compound.
Median_High_Control is defined as the median luminescence value of sample wells treated with 33 ng/mL IL-6 (IL-6 EC80, set as 100% activation).
A mathematical algorithm was used to determine nominally activating compounds in the primary screen. Two values were calculated: (1) the average percent potentiation of all compounds tested, and (2) three times their standard deviation. The sum of these two values was used as a cutoff parameter, i.e. any compound that exhibited greater % potentiation than the cutoff parameter was declared active.
The reported Pubchem_Activity_Score has been normalized. % Activation values of greater than or equal to 200 are reported as activity score 100. Negative % activation values are reported as activity score zero.
List of Reagents:
Dulbecco's Modified Eagle's Media I (Invitrogen, part# 11965-092)
Dulbecco's Modified Eagle's Media, no Phenol Red (Invitrogen, part# 21063-029)
Fetal Bovine Serum (Hyclone, part# SH30088-03)
100X Penicillin-Streptomycin-Neomycin mix (Invitrogen, part# 15640-055).
Neomycin B (Sigma-Aldrich, St. Louis, MO, part 33492)
Recombinant human IL-6 (Peprotech, Rocky Hill, NJ, part# 200-06)
Nifuroxazide (Sigma-Aldrich, part# N 2641)
SteadyLite HTS Assay Kit (PerkinElmer, part# 6016989)
Comment
All data reported were normalized on a per-plate basis. Each plate was normalized using same-plate controls. The inhibitor nifuroxazide had an IC50 in the range of 5-13 micromolar. Possible artifacts of this assay can include, but are not limited to: dust or lint located in or on wells of the microtiter plate, compounds that non-specifically modulate STAT3 or luciferase activity, and compounds that quench or enhance luminescence within the well. All test compound concentrations reported are nominal; the specific concentration for a particular test compound may vary based upon the actual sample provided by the MLSMR.
Categorized Comment - additional comments and annotations
From PubChem:
Assay Format: Cell-based
Result Definitions
TIDNameDescriptionHistogramTypeUnit
OutcomeThe BioAssay activity outcomeOutcome
ScoreThe BioAssay activity ranking scoreInteger
1Activation (5.6μM**)Normalized percent activation of the primary screen at a compound concentration of 5.6 micromolar.Float%

** Test Concentration.

Data Table (Concise)
Data Table ( Complete ):     View Active Data    View All Data
Classification
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